STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAT14Lysine acetyltransferase 14. (794 aa)    
Predicted Functional Partners:
SGF29
SAGA complex associated factor 29.
   
 0.996
YEATS2
YEATS domain containing 2.
   
 0.990
Zzz3
Uncharacterized protein.
   
 0.990
TADA3
Transcriptional adaptor 3.
    
 0.986
DR1
Down-regulator of transcription 1.
    
 0.981
TADA2A
Transcriptional adapter.
    
 0.964
KAT2B
Lysine acetyltransferase 2B.
    
 0.962
KAT2A
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.962
MBIP
MAP3K12 binding inhibitory protein 1.
    
 0.954
WDR5
WD repeat domain 5.
    
 0.919
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.