DENND4B protein (Ictidomys tridecemlineatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

DENND4B

DENN domain containing 4B. (1506 aa)

Predicted Functional Partners:

RAB10

0.731

I3M0E2_ICTTR

0.645

RAB8B

0.620

RAB8A

0.620

DENND5B

0.575

DENND1A

0.538

Rab13

0.537

RAB15

0.537

GAREM1

0.528

GAREM2

0.528

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DENND1A	DENND4B	ENSSTOP00000021487	ENSSTOP00000009476	DENN domain containing 1A.	DENN domain containing 4B.	0.538
DENND1A	DENND5B	ENSSTOP00000021487	ENSSTOP00000006637	DENN domain containing 1A.	DENN domain containing 5B.	0.464
DENND1A	I3M0E2_ICTTR	ENSSTOP00000021487	ENSSTOP00000002169	DENN domain containing 1A.	Uncharacterized protein.	0.650
DENND1A	RAB15	ENSSTOP00000021487	ENSSTOP00000027908	DENN domain containing 1A.	RAB15, member RAS oncogene family.	0.474
DENND1A	Rab13	ENSSTOP00000021487	ENSSTOP00000010065	DENN domain containing 1A.	Uncharacterized protein.	0.441
DENND4B	DENND1A	ENSSTOP00000009476	ENSSTOP00000021487	DENN domain containing 4B.	DENN domain containing 1A.	0.538
DENND4B	DENND5B	ENSSTOP00000009476	ENSSTOP00000006637	DENN domain containing 4B.	DENN domain containing 5B.	0.575
DENND4B	GAREM1	ENSSTOP00000009476	ENSSTOP00000002062	DENN domain containing 4B.	GRB2 associated regulator of MAPK1 subtype 1.	0.528
DENND4B	GAREM2	ENSSTOP00000009476	ENSSTOP00000022421	DENN domain containing 4B.	GRB2 associated regulator of MAPK1 subtype 2.	0.528
DENND4B	I3M0E2_ICTTR	ENSSTOP00000009476	ENSSTOP00000002169	DENN domain containing 4B.	Uncharacterized protein.	0.645
DENND4B	RAB10	ENSSTOP00000009476	ENSSTOP00000016791	DENN domain containing 4B.	RAB10, member RAS oncogene family.	0.731
DENND4B	RAB15	ENSSTOP00000009476	ENSSTOP00000027908	DENN domain containing 4B.	RAB15, member RAS oncogene family.	0.537
DENND4B	RAB8A	ENSSTOP00000009476	ENSSTOP00000021674	DENN domain containing 4B.	RAB8A, member RAS oncogene family.	0.620
DENND4B	RAB8B	ENSSTOP00000009476	ENSSTOP00000014361	DENN domain containing 4B.	RAB8B, member RAS oncogene family.	0.620
DENND4B	Rab13	ENSSTOP00000009476	ENSSTOP00000010065	DENN domain containing 4B.	Uncharacterized protein.	0.537
DENND5B	DENND1A	ENSSTOP00000006637	ENSSTOP00000021487	DENN domain containing 5B.	DENN domain containing 1A.	0.464
DENND5B	DENND4B	ENSSTOP00000006637	ENSSTOP00000009476	DENN domain containing 5B.	DENN domain containing 4B.	0.575
DENND5B	I3M0E2_ICTTR	ENSSTOP00000006637	ENSSTOP00000002169	DENN domain containing 5B.	Uncharacterized protein.	0.629
GAREM1	DENND4B	ENSSTOP00000002062	ENSSTOP00000009476	GRB2 associated regulator of MAPK1 subtype 1.	DENN domain containing 4B.	0.528
GAREM2	DENND4B	ENSSTOP00000022421	ENSSTOP00000009476	GRB2 associated regulator of MAPK1 subtype 2.	DENN domain containing 4B.	0.528