STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA2Integrin subunit alpha 2; Belongs to the integrin alpha chain family. (1183 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.983
Itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.948
FN1
Fibronectin 1.
    
 0.940
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.938
ITGB7
Integrin beta; Belongs to the integrin beta chain family.
   
 0.931
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.929
ITGB4
Integrin beta.
   
 0.925
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.923
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 
0.922
COL1A1
Collagen type I alpha 1 chain.
    
 0.917
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.