STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COG7Component of oligomeric golgi complex 7. (770 aa)    
Predicted Functional Partners:
COG1
Component of oligomeric golgi complex 1.
    
 0.999
COG3
Component of oligomeric golgi complex 3.
    
 0.999
Cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.999
COG2
Component of oligomeric golgi complex 2.
    
 0.999
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.999
COG5
Component of oligomeric golgi complex 5.
   
 0.999
COG4
Component of oligomeric golgi complex 4.
    
 0.995
SMIM7
Small integral membrane protein 7.
    
 0.983
STX5
Syntaxin 5.
     
 0.887
VPS53
VPS53 subunit of GARP complex.
   
 
 0.885
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.