STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2AC6Histone H2A; Belongs to the histone H2A family. (130 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.993
KDM6B
Lysine demethylase 6B.
    
 0.815
KDM6A
Lysine demethylase 6A.
    
 0.815
ENSSTOP00000026845
Histone H2B; Belongs to the histone H2B family.
 
 0.812
LOC101957760
Histone H2B; Belongs to the histone H2B family.
 
 0.808
LOC101957469
Histone H2B type 1-K.
 
 0.808
LOC101974663
Histone H2A; Belongs to the histone H2A family.
  
0.751
H2AZ2
Histone H2A; Belongs to the histone H2A family.
  
0.750
LOC101965844
Histone H3; Belongs to the histone H3 family.
 
 
 0.726
H2BU1
Histone H2B; Belongs to the histone H2B family.
 
 0.726
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.