STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUFY2RUN and FYVE domain containing 2. (611 aa)    
Predicted Functional Partners:
WDFY4
WDFY family member 4.
   
 
 0.846
UVRAG
UV radiation resistance associated.
    
 0.772
RUFY1
RUN and FYVE domain containing 1.
  
 
  
0.755
RUFY4
RUN and FYVE domain containing 4.
    
 
0.575
RAB4A
RAB4A, member RAS oncogene family.
    
 0.568
Rab4b
Uncharacterized protein.
    
 0.568
PBLD
Phenazine biosynthesis like protein domain containing.
 
    
 0.552
RAB33A
RAB33A, member RAS oncogene family.
    
 
 0.530
EPHA3
EPH receptor A3.
     
 0.526
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.456
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.