STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAPSANapsin A aspartic peptidase; Belongs to the peptidase A1 family. (435 aa)    
Predicted Functional Partners:
CTSH
Cathepsin H; Belongs to the peptidase C1 family.
   
 0.807
SFTPC
Surfactant protein C.
   
 
 0.798
SFTPB
Surfactant protein B.
   
 0.798
AGT
Angiotensinogen; Belongs to the serpin family.
    
 0.781
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.780
BCL2
BCL2 apoptosis regulator.
     
 0.769
CTSO
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.760
BID
BH3-interacting domain death agonist; Counters the protective effect of Bcl-2.
   
 
  0.750
XIAP
X-linked inhibitor of apoptosis.
    
  0.748
LAMP1
Lysosomal associated membrane protein 1.
   
 
 0.747
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.