STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM98Transmembrane protein 98. (226 aa)    
Predicted Functional Partners:
PRSS56
Serine protease 56; Belongs to the peptidase S1 family.
      
 0.608
SCARA3
Scavenger receptor class A member 3.
      
 0.491
PPP1R32
Protein phosphatase 1 regulatory subunit 32.
      
 0.480
MFRP
Membrane frizzled-related protein.
      
 0.470
TMEM176A
Transmembrane protein 176A.
      
 0.454
VAMP8
Vesicle associated membrane protein 8.
    
 
 0.425
KANSL3
KAT8 regulatory NSL complex subunit 3.
      
 0.408
MYRF
Myelin regulatory factor.
      
 0.407
GRN
Granulin precursor.
 
      0.406
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.