STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN7Tetraspanin. (249 aa)    
Predicted Functional Partners:
PICK1
Protein interacting with PRKCA 1.
     
 0.940
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.692
MST1R
Macrophage stimulating 1 receptor.
    
 0.686
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 
 0.611
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.606
GRIP2
Glutamate receptor interacting protein 2.
    
 0.603
CD19
CD19 molecule.
    
 0.602
GRIP1
Glutamate receptor interacting protein 1.
     
 0.575
TSPAN2
Tetraspanin.
   
  
0.569
IGSF8
Immunoglobulin superfamily member 8.
    
 
 0.556
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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