STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD44Ankyrin repeat domain 44. (993 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
   
 0.875
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
    
 0.863
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.756
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.756
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.614
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.614
IFT81
Intraflagellar transport 81.
    
 0.606
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.603
Rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.602
REL
REL proto-oncogene, NF-kB subunit.
   
 0.596
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.