STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARRDC4Arrestin domain containing 4. (417 aa)    
Predicted Functional Partners:
NEDD4
E3 ubiquitin-protein ligase.
    
 
 0.847
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.804
TXN
Thioredoxin; Belongs to the thioredoxin family.
    
 0.760
ENSSTOP00000025853
Uncharacterized protein.
    
 0.760
TXN2
Thioredoxin 2.
    
 0.757
NME8
NME/NM23 family member 8.
    
 0.698
NME9
NME/NM23 family member 9; Belongs to the NDK family.
    
 0.675
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2.
    
 
 0.637
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.605
WWP2
E3 ubiquitin-protein ligase.
    
 
 0.575
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.