STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAT14N-acetyltransferase 14 (putative). (206 aa)    
Predicted Functional Partners:
NAA35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
 0.921
LOC101973962
Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development.
    
 0.733
Snrpe
Small nuclear ribonucleoprotein polypeptide E.
    
 0.733
ZNF579
Zinc finger protein 579.
  
  
 0.619
NAT9
N-acetyltransferase 9 (putative).
      
 0.607
Nat8l
N-acetyltransferase domain-containing protein.
      
 0.595
ASNS
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.569
ASS1
Argininosuccinate synthase 1.
   
 
  0.568
FIZ1
FLT3 interacting zinc finger 1.
  
   
 0.561
RIMKLA
Ribosomal modification protein rimK like family member A.
     
 0.514
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.