TRPM1 protein (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Coexpression

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[Homology]

Score

TRPM1

Transient receptor potential cation channel subfamily M member 1. (1616 aa)

Predicted Functional Partners:

NUDT9

0.857

GNB1

0.737

MCOLN1

0.726

GNG2

0.662

GNB4

0.646

GNB2

0.606

TRPM2

0.583

OCA2

0.580

GNB3

0.571

PPP1CC

0.567

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNB1	GNB2	ENSSTOP00000009443	ENSSTOP00000015043	G protein subunit beta 1.	G protein subunit beta 2.	0.526
GNB1	GNB3	ENSSTOP00000009443	ENSSTOP00000013951	G protein subunit beta 1.	G protein subunit beta 3.	0.797
GNB1	GNB4	ENSSTOP00000009443	ENSSTOP00000004669	G protein subunit beta 1.	G protein subunit beta 4.	0.534
GNB1	GNG2	ENSSTOP00000009443	ENSSTOP00000015121	G protein subunit beta 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.985
GNB1	TRPM1	ENSSTOP00000009443	ENSSTOP00000011470	G protein subunit beta 1.	Transient receptor potential cation channel subfamily M member 1.	0.737
GNB2	GNB1	ENSSTOP00000015043	ENSSTOP00000009443	G protein subunit beta 2.	G protein subunit beta 1.	0.526
GNB2	GNB3	ENSSTOP00000015043	ENSSTOP00000013951	G protein subunit beta 2.	G protein subunit beta 3.	0.848
GNB2	GNB4	ENSSTOP00000015043	ENSSTOP00000004669	G protein subunit beta 2.	G protein subunit beta 4.	0.526
GNB2	GNG2	ENSSTOP00000015043	ENSSTOP00000015121	G protein subunit beta 2.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.992
GNB2	TRPM1	ENSSTOP00000015043	ENSSTOP00000011470	G protein subunit beta 2.	Transient receptor potential cation channel subfamily M member 1.	0.606
GNB3	GNB1	ENSSTOP00000013951	ENSSTOP00000009443	G protein subunit beta 3.	G protein subunit beta 1.	0.797
GNB3	GNB2	ENSSTOP00000013951	ENSSTOP00000015043	G protein subunit beta 3.	G protein subunit beta 2.	0.848
GNB3	GNB4	ENSSTOP00000013951	ENSSTOP00000004669	G protein subunit beta 3.	G protein subunit beta 4.	0.797
GNB3	GNG2	ENSSTOP00000013951	ENSSTOP00000015121	G protein subunit beta 3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.992
GNB3	TRPM1	ENSSTOP00000013951	ENSSTOP00000011470	G protein subunit beta 3.	Transient receptor potential cation channel subfamily M member 1.	0.571
GNB4	GNB1	ENSSTOP00000004669	ENSSTOP00000009443	G protein subunit beta 4.	G protein subunit beta 1.	0.534
GNB4	GNB2	ENSSTOP00000004669	ENSSTOP00000015043	G protein subunit beta 4.	G protein subunit beta 2.	0.526
GNB4	GNB3	ENSSTOP00000004669	ENSSTOP00000013951	G protein subunit beta 4.	G protein subunit beta 3.	0.797
GNB4	GNG2	ENSSTOP00000004669	ENSSTOP00000015121	G protein subunit beta 4.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.983
GNB4	TRPM1	ENSSTOP00000004669	ENSSTOP00000011470	G protein subunit beta 4.	Transient receptor potential cation channel subfamily M member 1.	0.646