STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1BZinc finger C2HC-type containing 1B. (214 aa)    
Predicted Functional Partners:
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 
 0.704
FAM163B
Family with sequence similarity 163 member B.
      
 0.603
ZDHHC22
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.600
SEC22C
SEC22 homolog C, vesicle trafficking protein; Belongs to the synaptobrevin family.
      
 0.586
METTL25
Methyltransferase like 25.
    
 
 0.482
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
      
 0.438
MIOS
Meiosis regulator for oocyte development.
      
 0.410
WDR59
WD repeat domain 59.
      
 0.408
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.