STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM62Transmembrane protein 62. (614 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.600
WDR90
WD repeat domain 90.
    
 0.574
MST1R
Macrophage stimulating 1 receptor.
    
 0.568
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.568
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.554
DTX4
Deltex E3 ubiquitin ligase 4.
    
 0.552
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.544
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.544
NCSTN
Nicastrin.
    
 0.542
COMMD4
COMM domain containing 4.
    
 0.540
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.