STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF598Zinc finger protein 598. (873 aa)    
Predicted Functional Partners:
Rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.822
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
    0.767
ASCC3
Activating signal cointegrator 1 complex subunit 3.
    
 
 0.748
LTN1
Listerin E3 ubiquitin protein ligase 1.
    
 
 0.737
LOC101961988
Ribosomal_S10 domain-containing protein.
    
 
 0.729
GIGYF2
GRB10 interacting GYF protein 2.
    
 
 0.727
RACK1
Receptor for activated C kinase 1.
    
 
 0.723
RPS10
Ribosomal protein S10.
    
 
 0.716
GCN1
GCN1 activator of EIF2AK4.
    
 
 0.681
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 
 0.665
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.