STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFCP2L1Transcription factor CP2 like 1. (479 aa)    
Predicted Functional Partners:
ESRRB
Estrogen related receptor beta.
    
 
 0.709
UBP1
Upstream binding protein 1.
  
 
  
0.614
TFCP2
Transcription factor CP2.
  
 
 
0.596
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
 
 0.555
SALL4
Spalt like transcription factor 4.
    
 
 0.548
LYPD1
LY6/PLAUR domain containing 1.
      
 0.474
PRDM14
PR/SET domain 14.
    
 
 0.457
GLI2
GLI family zinc finger 2.
    
 
 0.453
PID1
Phosphotyrosine interaction domain containing 1.
      
 0.446
Nanog
Homeobox domain-containing protein.
    
 
 0.446
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.