STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C6General transcription factor IIIC subunit 6. (211 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor IIIC subunit 5.
   
 0.975
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.949
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.932
GTF3C2
General transcription factor IIIC subunit 2.
    
 0.915
Gtf3c4
Uncharacterized protein.
    
 0.899
ENSSTOP00000029407
Uncharacterized protein.
    
 0.899
ZNF512
Zinc finger protein 512.
    
 0.771
ZNF512B
Zinc finger protein 512B.
    
 0.771
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
     
  0.707
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
     
  0.666
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.