STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBNL2Muscleblind like splicing regulator 2. (373 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1.
    
 
 0.652
QKI
QKI, KH domain containing RNA binding.
   
 
 0.614
CLCN1
Chloride channel protein.
      
 0.552
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 
 0.494
MBNL1
Muscleblind like splicing regulator 1.
  
 
0.477
CNBP
CCHC-type zinc finger nucleic acid binding protein.
      
 0.451
CELF2
CUGBP Elav-like family member 2.
    
 
 0.447
CELF3
CUGBP Elav-like family member 3.
      
 0.414
ESRP1
Epithelial splicing regulatory protein 1.
    
 
 0.406
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.