STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNGA4Cyclic nucleotide gated channel subunit alpha 4. (530 aa)    
Predicted Functional Partners:
I3M9X0_ICTTR
Cyclic nucleotide-binding domain-containing protein.
  
0.980
CNGB3
Cyclic nucleotide gated channel subunit beta 3.
  
0.961
CNGA2
Cyclic nucleotide gated channel subunit alpha 2.
  
  
0.935
CALML6
Calmodulin like 6.
     
 0.881
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
     
 0.863
CALML4
Calmodulin like 4.
     
 0.840
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
  
  
0.787
CALM1
Calmodulin 1; Belongs to the calmodulin family.
     
 0.644
CALM2
Calmodulin 2; Belongs to the calmodulin family.
     
 0.644
CALM3
Calmodulin 3.
     
 0.644
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.