STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMPPBGDP-mannose pyrophosphorylase B. (360 aa)    
Predicted Functional Partners:
GMPPA
GDP-mannose pyrophosphorylase A.
  
0.998
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.964
EIF2S2
Eukaryotic translation initiation factor 2 subunit beta.
   
 0.958
Alg1
Uncharacterized protein.
  
 0.958
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.956
PMM2
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.949
UXS1
UDP-glucuronate decarboxylase 1.
  
 0.949
PMM1
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.949
ALG2
ALG2 alpha-1,3/1,6-mannosyltransferase.
  
 0.941
UGP2
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.935
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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