STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOTMyotilin. (497 aa)    
Predicted Functional Partners:
Pkd1l2
Uncharacterized protein.
    
 0.940
PKD1
Polycystin 1, transient receptor potential channel interacting.
    
 0.805
PKDREJ
Polycystin family receptor for egg jelly.
    
 0.805
MYOZ1
Myozenin 1.
   
  
 0.778
NEB
Nebulin.
   
  
 0.717
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 
 0.711
EXOC5
Exocyst complex component 5.
     
 0.707
ACTN2
Actinin alpha 2.
   
 
 0.706
FLNC
Filamin C.
    
 
 0.678
CCDC25
Coiled-coil domain containing 25.
    
 0.677
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.