STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TECTBTectorin beta. (339 aa)    
Predicted Functional Partners:
TTC8
Tetratricopeptide repeat domain 8.
      
 0.591
BRICD5
BRICHOS domain containing 5.
      
 0.591
CEACAM16
Carcinoembryonic antigen related cell adhesion molecule 16.
     
 0.577
OTOA
Otoancorin.
      
 0.570
LGMN
Legumain.
      
 0.561
ENSSTOP00000029878
Uncharacterized protein.
      
 0.560
COCH
Cochlin.
      
 0.554
ENSSTOP00000028967
Uncharacterized protein.
      
 0.554
AGR3
Anterior gradient 3, protein disulphide isomerase family member.
      
 0.553
ZDHHC6
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.506
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.