STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3MLW0_ICTTRUncharacterized protein. (78 aa)    
Predicted Functional Partners:
LOC101954381
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.952
I3LZW4_ICTTR
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.952
ENSSTOP00000028911
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.952
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.938
ENSSTOP00000029566
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.938
OGDH
Oxoglutarate dehydrogenase.
    
 
 0.934
DHTKD1
Dehydrogenase E1 and transketolase domain containing 1.
    
 
 0.934
OGDHL
Oxoglutarate dehydrogenase like.
    
 
 0.934
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
   
 0.932
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.910
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.