Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBFB | FOXP2 | ENSSTOP00000025127 | ENSSTOP00000008036 | Core-binding factor subunit beta. | Forkhead box P2. | 0.646 |
CBFB | FOXP3 | ENSSTOP00000025127 | ENSSTOP00000003963 | Core-binding factor subunit beta. | Forkhead box P3. | 0.778 |
CBFB | FOXP4 | ENSSTOP00000025127 | ENSSTOP00000012900 | Core-binding factor subunit beta. | Forkhead box P4. | 0.646 |
CBFB | Foxp1 | ENSSTOP00000025127 | ENSSTOP00000022242 | Core-binding factor subunit beta. | Fork-head domain-containing protein. | 0.646 |
CBFB | HAND1 | ENSSTOP00000025127 | ENSSTOP00000017073 | Core-binding factor subunit beta. | Heart and neural crest derivatives expressed 1. | 0.457 |
CBFB | RUNX1 | ENSSTOP00000025127 | ENSSTOP00000017745 | Core-binding factor subunit beta. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.980 |
CBFB | RUNX2 | ENSSTOP00000025127 | ENSSTOP00000029414 | Core-binding factor subunit beta. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.987 |
CBFB | RUNX3 | ENSSTOP00000025127 | ENSSTOP00000024287 | Core-binding factor subunit beta. | RUNX family transcription factor 3. | 0.980 |
FOXP2 | CBFB | ENSSTOP00000008036 | ENSSTOP00000025127 | Forkhead box P2. | Core-binding factor subunit beta. | 0.646 |
FOXP2 | FOXP3 | ENSSTOP00000008036 | ENSSTOP00000003963 | Forkhead box P2. | Forkhead box P3. | 0.781 |
FOXP2 | FOXP4 | ENSSTOP00000008036 | ENSSTOP00000012900 | Forkhead box P2. | Forkhead box P4. | 0.899 |
FOXP2 | Foxp1 | ENSSTOP00000008036 | ENSSTOP00000022242 | Forkhead box P2. | Fork-head domain-containing protein. | 0.756 |
FOXP2 | NFATC2 | ENSSTOP00000008036 | ENSSTOP00000029217 | Forkhead box P2. | Nuclear factor of activated T cells 2. | 0.919 |
FOXP2 | RORA | ENSSTOP00000008036 | ENSSTOP00000011114 | Forkhead box P2. | RAR related orphan receptor A. | 0.554 |
FOXP2 | RUNX1 | ENSSTOP00000008036 | ENSSTOP00000017745 | Forkhead box P2. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.601 |
FOXP2 | RUNX2 | ENSSTOP00000008036 | ENSSTOP00000029414 | Forkhead box P2. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.601 |
FOXP2 | RUNX3 | ENSSTOP00000008036 | ENSSTOP00000024287 | Forkhead box P2. | RUNX family transcription factor 3. | 0.601 |
FOXP3 | CBFB | ENSSTOP00000003963 | ENSSTOP00000025127 | Forkhead box P3. | Core-binding factor subunit beta. | 0.778 |
FOXP3 | FOXP2 | ENSSTOP00000003963 | ENSSTOP00000008036 | Forkhead box P3. | Forkhead box P2. | 0.781 |
FOXP3 | FOXP4 | ENSSTOP00000003963 | ENSSTOP00000012900 | Forkhead box P3. | Forkhead box P4. | 0.778 |
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