STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLUL1Clusterin; Belongs to the clusterin family. (516 aa)    
Predicted Functional Partners:
RBP3
Retinol binding protein 3.
   
  
 0.940
Guca1a
Uncharacterized protein.
   
    0.785
XRCC6
X-ray repair cross complementing 6.
    
 
 0.686
C8B
Complement C8 beta chain.
   
 0.625
APP
Amyloid beta precursor protein.
    
 0.595
VTN
SMB domain-containing protein.
    
 
 0.584
LTF
Lactotransferrin; Belongs to the transferrin family.
   
 0.577
C6
Complement C6.
   
 0.560
C7
Complement C7.
   
 0.560
RHO
Rhodopsin.
   
  
 0.536
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.