STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX6Iroquois homeobox 6. (436 aa)    
Predicted Functional Partners:
HHEX
Hematopoietically expressed homeobox.
    
 
 0.575
SRF
Serum response factor.
   
 
 0.574
PBX2
PBX homeobox 2.
    
0.568
PBX4
PBX homeobox 4.
    
0.568
PBX1
PBX homeobox 1.
    
 0.568
PBX3
PBX homeobox 3.
    
0.568
TSHZ1
Teashirt zinc finger homeobox 1.
    
 0.564
TSHZ3
Teashirt zinc finger homeobox 3.
    
 0.561
TSHZ2
Teashirt zinc finger homeobox 2.
    
 0.550
IRX1
Iroquois homeobox 1.
   
 
0.475
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.