STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC3Transmembrane channel-like protein. (1098 aa)    
Predicted Functional Partners:
CIB2
Calcium and integrin binding family member 2.
    
 0.937
CIB1
Calcium and integrin binding 1.
    
 0.902
ENSSTOP00000029878
Uncharacterized protein.
    
 0.902
TMIE
Transmembrane inner ear.
   
 
 0.744
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.600
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 
 0.590
LHFPL4
LHFPL tetraspan subfamily member 4.
   
 
 0.590
ENSSTOP00000031958
Uncharacterized protein.
   
 
 0.590
MESD
Mesoderm development LRP chaperone.
    
 
 0.585
WDR90
WD repeat domain 90.
    
 0.574
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.