STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP350Centrosomal protein 350. (3116 aa)    
Predicted Functional Partners:
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
  0.886
XRN1
5'-3' exoribonuclease 1.
   
   0.796
PHIP
Pleckstrin homology domain interacting protein.
   
 
  0.783
ENSSTOP00000025169
Uncharacterized protein.
   
    0.778
PHF3
PHD finger protein 3.
   
    0.768
ATAD2B
ATPase family AAA domain containing 2B.
   
  
 0.761
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 0.723
CEP19
Centrosomal protein 19.
    
 
 0.698
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
    0.689
RC3H2
Ring finger and CCCH-type domains 2.
   
    0.669
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.