STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC5AC-type lectin domain containing 5A. (185 aa)    
Predicted Functional Partners:
TYROBP
TYRO protein tyrosine kinase binding protein.
   
 0.899
CLEC4D
C-type lectin domain family 4 member D.
   
 
 0.764
LOC101958749
C-type lectin domain-containing protein.
   
0.759
HCST
Hematopoietic cell signal transducer.
    
 0.747
FCER1G
Fc fragment of IgE receptor Ig.
   
 0.721
SYK
Tyrosine-protein kinase.
    
 0.651
TNN
Tenascin N.
    
 0.561
TNC
Tenascin C.
    
 0.561
TNR
Tenascin R.
    
 0.561
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
 0.543
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.