STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Eef2kmtUncharacterized protein. (303 aa)    
Predicted Functional Partners:
EEF2
Eukaryotic translation elongation factor 2.
    
 0.908
GALC
Galactosylceramidase.
    
  0.837
B9D1
B9 domain containing 1.
    
 0.832
B9D2
B9 domain containing 2.
    
 0.813
KIN
Kin17 DNA and RNA binding protein.
    
 0.785
AHI1
Abelson helper integration site 1.
    
 0.768
MKS1
MKS transition zone complex subunit 1.
    
 0.767
TMEM67
Transmembrane protein 67.
     
 0.756
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 0.745
I3M6E0_ICTTR
DUF5523 domain-containing protein.
    
 0.745
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.