STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEPACAMHepatic and glial cell adhesion molecule. (418 aa)    
Predicted Functional Partners:
Serpinb12
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.575
CWH43
Cell wall biogenesis 43 C-terminal homolog.
      
 0.563
Sbsn
Uncharacterized protein.
      
 0.531
KCNJ10
Potassium voltage-gated channel subfamily J member 10.
   
  
 0.415
PRDX6
Peroxiredoxin 6.
      
 0.414
EPDR1
Ependymin related 1.
      
 0.414
ABCD1
ATP binding cassette subfamily D member 1.
      
 0.410
CHPF2
Hexosyltransferase.
      
 0.410
SDF2
Stromal cell derived factor 2.
      
 0.408
MDN1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
      
 0.408
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.