STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFTPCSurfactant protein C. (189 aa)    
Predicted Functional Partners:
SFTPB
Surfactant protein B.
   
 
 0.981
SFTPD
Surfactant protein D.
   
 
 0.970
LOC101977784
C-type lectin domain-containing protein.
   
 
 0.957
SCGB1A1
Secretoglobin family 1A member 1.
   
  
 0.883
AGER
Advanced glycosylation end-product specific receptor.
   
  
 0.874
PSAP
Prosaposin; Prosaposin: Behaves as a myelinotrophic and neurotrophic factor, these effects are mediated by its G-protein-coupled receptors, GPR37 and GPR37L1, undergoing ligand-mediated internalization followed by ERK phosphorylation signaling.
   
 
 0.806
LOC101957736
Uncharacterized protein.
   
  
 0.805
NAPSA
Napsin A aspartic peptidase; Belongs to the peptidase A1 family.
   
 
 0.798
LOC101977501
C-type lectin domain-containing protein.
   
 
 0.794
SCGB3A2
Secretoglobin family 3A member 2.
   
  
 0.787
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.