STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC12Homeobox C12. (280 aa)    
Predicted Functional Partners:
HOXC6
Homeobox C6.
    
 
0.447
HOXC5
Homeobox C5.
    
 
0.441
HOXB7
Homeobox B7.
    
 
0.441
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 
 0.437
PBX2
PBX homeobox 2.
    
 
 0.436
PBX4
PBX homeobox 4.
    
 
 0.436
PBX1
PBX homeobox 1.
    
 
 0.436
PBX3
PBX homeobox 3.
    
 
 0.436
HOXA2
Homeobox A2.
  
 
 
0.419
HOXB2
Homeobox B2.
  
 
 
0.414
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.