STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHISA4Shisa family member 4. (197 aa)    
Predicted Functional Partners:
UMPS
Uridine monophosphate synthetase.
   
 
  0.696
TBP
TATA-box binding protein.
    
 
 0.686
TBPL2
TATA-box binding protein like 2.
    
 
 0.686
H2AZ2
Histone H2A; Belongs to the histone H2A family.
    
 
 0.669
LOC101974663
Histone H2A; Belongs to the histone H2A family.
    
 
 0.669
NAP1L4
Nucleosome assembly protein 1 like 4; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.632
NAP1L5
Nucleosome assembly protein 1 like 5; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.632
NAP1L2
Nucleosome assembly protein 1 like 2; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.629
ENSSTOP00000027364
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.629
ENSSTOP00000028827
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.629
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.