STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM133BFamily with sequence similarity 133 member B. (247 aa)    
Predicted Functional Partners:
MFAP3L
Microfibril associated protein 3 like.
      
 0.580
CLCN3
Chloride channel protein.
      
 0.580
CCDC174
Coiled-coil domain containing 174.
   
    0.542
PTN
Pleiotrophin.
      
 0.518
THOC7
THO complex 7.
      
 0.461
FAM204A
Family with sequence similarity 204 member A.
      
 0.456
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.426
I3MT15_ICTTR
WD_REPEATS_REGION domain-containing protein.
      
 0.414
C3orf70
Chromosome 3 open reading frame 70.
      
 0.410
Ccdc73
Uncharacterized protein.
      
 0.410
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.