STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXNB2Plexin B2. (1842 aa)    
Predicted Functional Partners:
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
    
 0.985
ARHGEF11
Rho guanine nucleotide exchange factor 11.
    
 0.981
RHOD
Ras homolog family member D.
    
 0.969
RND1
Rho family GTPase 1.
    
 0.967
SEMA4C
Semaphorin 4C; Belongs to the semaphorin family.
   
0.957
ARHGEF12
Rho guanine nucleotide exchange factor 12.
    
 0.954
SEMA4G
Semaphorin 4G; Belongs to the semaphorin family.
    
0.937
SEMA4A
Semaphorin 4A; Belongs to the semaphorin family.
    
0.937
SEMA4B
Semaphorin 4B; Belongs to the semaphorin family.
    
0.933
SEMA4F
Ssemaphorin 4F; Belongs to the semaphorin family.
    
 0.917
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.