STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101971387Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
ASPH
Aspartate beta-hydroxylase.
   
 
 0.687
NIPBL
Nipped-B protein.
    
 0.664
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.600
RYR2
Ryanodine receptor 2.
   
 0.588
RYR1
Ryanodine receptor 1.
   
 0.588
RYR3
Ryanodine receptor 3.
   
 0.588
MYL1
Myosin light chain 1.
   
 
 0.575
WDR90
WD repeat domain 90.
    
 0.574
MST1R
Macrophage stimulating 1 receptor.
    
 0.568
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.568
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.