STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rin3Ras and Rab interactor 3. (906 aa)    
Predicted Functional Partners:
CD2AP
CD2 associated protein.
    
 
 0.941
BIN1
Bridging integrator 1.
    
 
 0.876
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
 
 0.797
Rabgef1
Uncharacterized protein.
    
0.777
RAB5B
RAB5B, member RAS oncogene family.
    
 0.753
AMPH
Amphiphysin.
    
 
 0.730
RAB31
RAB31, member RAS oncogene family.
    
 0.712
ABL2
Tyrosine-protein kinase.
    
 0.706
ABL1
Tyrosine-protein kinase.
    
 0.706
ALS2CL
ALS2 C-terminal like.
     
 0.683
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.