STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO15AMyosin XVA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (3517 aa)    
Predicted Functional Partners:
WHRN
Whirlin.
    
 0.988
ACTA1
Actin alpha 1, skeletal muscle.
    
 0.925
USH1G
USH1 protein network component sans.
   
 0.889
EPS8
Epidermal growth factor receptor pathway substrate 8.
    
 0.854
USH1C
USH1 protein network component harmonin.
   
 0.848
ESPN
Espin.
    
 0.833
ESPNL
Espin like.
    
 0.788
EPS8L2
EPS8 like 2.
    
 0.784
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.770
LOC101966943
Uncharacterized protein.
    
 0.737
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.