STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCN2Cellular communication network factor 2. (348 aa)    
Predicted Functional Partners:
CCN4
Cellular communication network factor 4.
  
  
 
0.767
FN1
Fibronectin 1.
   
 
 0.680
HSPG2
Heparan sulfate proteoglycan 2.
    
 
 0.636
TGFB1
Transforming growth factor beta; Belongs to the TGF-beta family.
   
  
 0.621
DCN
Decorin; May affect the rate of fibrils formation.
   
  
 0.618
ACTA2
Actin alpha 2, smooth muscle.
   
 
 0.589
NTRK1
Tyrosine-protein kinase receptor.
      
 0.586
EDN1
Endothelin 1.
   
  
 0.580
SMAD7
Mothers against decapentaplegic homolog.
   
  
 0.577
MMP9
Matrix metallopeptidase 9.
      
 0.567
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.