STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK1ATetraspanin. (257 aa)    
Predicted Functional Partners:
UPK2
Uroplakin 2.
  
 
 0.817
MST1R
Macrophage stimulating 1 receptor.
    
  0.686
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.686
UPK3A
Uroplakin 3A.
   
 
 0.680
UPK1B
Tetraspanin.
  
  
0.613
UPK3B
Uroplakin 3B.
      
 0.596
CD19
CD19 molecule.
    
 0.594
TSPAN31
Tetraspanin 31; Belongs to the tetraspanin (TM4SF) family.
      
 0.514
PDGFB
Platelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family.
    
 0.477
RBP5
Retinol binding protein 5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.446
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.