STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3BUbiquitin protein ligase E3B. (1068 aa)    
Predicted Functional Partners:
Ube3c
HECT domain-containing protein.
   
 
0.801
ENSSTOP00000026806
HECT domain-containing protein.
   
 
0.801
TRIP12
Thyroid hormone receptor interactor 12.
     
0.755
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.618
ZNF18
Zinc finger protein 18.
      
 0.582
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.531
ENSSTOP00000029566
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.531
MROH8
Maestro heat like repeat family member 8.
      
 0.457
UBQLN4
Ubiquilin 4.
   
 
 0.425
SDE2
SDE2 telomere maintenance homolog.
      
 0.422
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.