STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGGHGProtein-glucosylgalactosylhydroxylysine glucosidase. (691 aa)    
Predicted Functional Partners:
YIPF6
Protein YIPF.
  
 0.962
TREH
Trehalase.
  
 0.955
GBE1
1,4-alpha-glucan branching enzyme 1.
  
 
 0.932
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.912
LOC101967464
Uncharacterized protein.
  
 
 0.882
ENSSTOP00000025862
Uncharacterized protein.
  
 
 0.882
Slc3a2
Uncharacterized protein.
  
 
 0.832
SLC3A1
Solute carrier family 3 member 1.
  
 
 0.832
LOC101973687
Alpha-amylase.
  
 
 0.832
LOC101974615
Alpha-amylase.
  
 
 0.832
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.