STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAPTM4BLysosomal protein transmembrane 4 beta. (226 aa)    
Predicted Functional Partners:
ENSSTOP00000024022
Uncharacterized protein.
  
 
 
0.861
LAPTM5
Lysosomal protein transmembrane 5.
     
 0.855
Laptm4a
Uncharacterized protein.
  
  
 
0.844
EGFR
Receptor protein-tyrosine kinase.
    
 
 0.623
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.504
Smim24
Small integral membrane protein 24.
   
  
 0.418
TMEM86A
Transmembrane protein 86A.
      
 0.410
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.