STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR42E2Short chain dehydrogenase/reductase family 42E, member 2. (423 aa)    
Predicted Functional Partners:
GSR
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.632
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.614
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
    
 0.595
TPRN
Taperin.
    
 0.595
GSS
Glutathione synthetase.
     
 0.559
PRDX6
Peroxiredoxin 6.
     
 0.556
AIFM3
Apoptosis inducing factor mitochondria associated 3.
     
 0.545
AIFM2
Apoptosis inducing factor mitochondria associated 2.
     
 0.545
GSTO1
Glutathione S-transferase omega 1; Belongs to the GST superfamily.
     
 0.508
GSTO2
Glutathione S-transferase omega 2; Belongs to the GST superfamily.
     
 0.508
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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