STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMILIN1Elastin microfibril interfacer 1. (1017 aa)    
Predicted Functional Partners:
MTMR9
Myotubularin related protein 9.
    
   0.779
LOC101958718
Myotubularin phosphatase domain-containing protein.
    
   0.671
Plac9
Uncharacterized protein.
    
   0.599
TEP1
Telomerase associated protein 1.
    
 0.571
I3M5T4_ICTTR
DUF4062 domain-containing protein.
    
 0.569
C1QC
Complement C1q C chain.
    
 
0.538
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.535
DCN
Decorin; May affect the rate of fibrils formation.
   
 
 0.517
ITGB2
Integrin beta.
   
 0.508
ITGB7
Integrin beta; Belongs to the integrin beta chain family.
   
 0.508
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.