STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3MWT6_ICTTRUncharacterized protein. (214 aa)    
Predicted Functional Partners:
Rabgef1
Uncharacterized protein.
   
 0.745
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.572
THAP4
THAP domain containing 4.
      
 0.542
ZAR1L
Zygote arrest 1 like.
      
 0.497
PAX9
Paired box 9.
      
 0.483
ANKRD27
Ankyrin repeat domain 27.
   
 0.473
GAPVD1
GTPase activating protein and VPS9 domains 1.
   
 0.473
STK25
Serine/threonine kinase 25.
      
 0.445
FARP2
FERM, ARH/RhoGEF and pleckstrin domain protein 2.
     
 0.445
AP1M2
AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 
 0.439
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (12%) [HD]