STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL4ADAMTS like 4. (1067 aa)    
Predicted Functional Partners:
B3GLCT
Beta 3-glucosyltransferase.
     
 0.716
POFUT2
Protein O-fucosyltransferase 2.
     
 0.655
FBN1
Fibrillin 1.
     
 0.620
SPON1
Spondin 1.
     
 0.545
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
    
 0.499
SPON2
Spondin 2.
     
 0.464
ADAM11
ADAM metallopeptidase domain 11.
    
 
 0.433
I3N1I6_ICTTR
Uncharacterized protein.
   
  
 0.430
P3H2
Prolyl 3-hydroxylase 2.
      
 0.426
MFAP4
Microfibril associated protein 4.
   
  
 0.413
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.