STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELENOOSelenoprotein O. (460 aa)    
Predicted Functional Partners:
SH3BGRL
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
   
    0.771
Cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
    0.771
St6galnac6
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
   
    0.771
LIAS
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
  0.762
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
   
  
 0.631
SEPHS1
Selenophosphate synthetase 1.
     
 0.628
MSRB1
Methionine sulfoxide reductase B1.
  
  
 0.612
ART3
NAD(P)(+)--arginine ADP-ribosyltransferase.
    
  0.611
SELENOT
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.610
SELENOK
Selenoprotein K.
      
 0.608
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.